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Lesson 1 of 6 / DNA and gene expression

Read the DNA molecule

How do pairing and direction support information storage?

In this lesson: Describe DNA nucleotide structure, double-stranded organisation and information-carrying role.

About 5 min

The key ideaDNA has two complementary, antiparallel nucleotide strands. The base sequence carries information; the covalent backbone and base pairing maintain the molecule.

Explore the idea

Zoom from one unit to paired strands

PSBaseP: phosphateS: deoxyribose sugar

Adjacent nucleotides join through phosphodiester bonds in the sugar-phosphate backbone. The variable base carries sequence information.

Explanation

A DNA nucleotide contains deoxyribose sugar, phosphate and a nitrogenous base: adenine, thymine, guanine or cytosine. Covalent phosphodiester bonds join nucleotides within each sugar-phosphate backbone. The base order varies and carries genetic information.

Two strands form a double helix with bases facing inwards. Adenine pairs with thymine through two hydrogen bonds; guanine pairs with cytosine through three. Complementary pairing gives each strand information about the other.

The strands are antiparallel: one runs 5' to 3' while its partner runs 3' to 5'. These direction labels refer to positions in the sugar backbone. Writing a complementary sequence directly underneath a given strand differs from rewriting that complement in the 5'-to-3' direction.

A gene is a DNA sequence whose information contributes to a functional RNA or polypeptide product. In the protein-synthesis examples here, the base sequence specifies a polypeptide through an RNA intermediate. DNA is the stored information, not material converted directly into protein.

Step by step
  1. 1

    Pair the bases

    Use A-T and G-C at corresponding positions.

  2. 2

    Label direction

    Opposite aligned strands run in opposite directions.

  3. 3

    Check what is requested

    If an answer must be written 5' to 3', reverse the written order of a complement initially aligned 3' to 5'.

Worked example

Complement and direction

A strand is 5'-A G T C-3'. Write its aligned complement and then that complement in the 5'-to-3' direction.

One way to explain it

Aligned: 3'-T C A G-5'. Rewritten 5' to 3': 5'-G A C T-3'. The paired positions remain complementary even though the written order changes.

Why this answer works
  • Pair each displayed base.
  • Use antiparallel direction labels.
  • Reverse the aligned complement only when the requested writing direction requires it.
Is this true? "Hydrogen bonds join adjacent nucleotides along a DNA strand."

Phosphodiester bonds join the backbone within a strand. Hydrogen bonds link complementary bases between strands.

Try a question

What is the aligned complement of 5'-A C G-3'?
You can return to this lesson any time.